Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945291.1_cds_XP_016487841.1_78537
CDS Infomation

[gene=LOC107807901] [db_xref=GeneID:107807901] [protein=endoglucanase 25-like] [protein_id=XP_016487841.1] [location=join(64461..64833,65234..65544,65790..66245,66405..66540,66624..66796,67044..67445)] [gbkey=CDS]
Sequence

ATGTACGGGAGAGATCCATGGGGAGGGGCACTGGAGATAAACGCAACCGATTCAGCAACA
GATGATGATAGGAGCAGGAACTTACAGGATTTTGACAAGGCGGCTTTGTCAAGGAATCTG
GATGAGACGCAGCAGAGTTGGTTGTTGGGTCCAACTGAGCAGAAGAAGAAGAAGTATGTC
GATCTTGGTTGTATTATTGTCAGTCGAAAGGTATTCAAATGGACTCTCGGCTGTATTATT
GCTGCTGCTCTCATTGCTGGTTTTGTTACTCTGATTGTCAAAACTGTTCCTAAGCACCGA
CAACGTAGTCCCCCACCGGATAATTACACTTTGGCTCTTCGCAAGGCACTTATGTTCTTC
AATGCCCAACGCTCTGGGAAACTACCTAAGCACAACAATGTATCATGGAGGGGGAGTTCA
GGTATGCAAGACGGCAAATCTGATGATTCAACTATGTTTAAGAATTTGGTTGGCGGCTAT
TATGATGCAGGAGATGCAATAAAGTTTAACTTCCCTCAATCTTTTGCTCTCACTATGTTA
AGTTGGAGTGTGATTGAGTATAGTGCAAAATATGAAGCTGCTGGGGAGCTCAGTCATGTC
AAAGATATTATTAAGTGGGGTACTGATTACCTCCTCAAAACCTTCAATTCCTCTGCTGAT
ACTATTGATCGCATTGTTGCACAGGTGGGGAAAGGGGATACTTCAGGAGGGCCAGATCCC
AATGATCACTATTGTTGGGTGCGTCCAGAAGACATTGATTATCCACGGCCTGTAACAGAA
TGTCACGGCTGCTCGGATCTTGCTGCCGAGATGGCTGCTGCTCTGGCTTCTGCCTCCATT
GTTTTTAAGGACAACAAGGTCTACTCACAGAAGCTCGTCCATGGTGCTAGAACTCTCTTC
AAATTTTCCAGGGAACAGCGTGGTAGATACAGTAGCAGTAATGAAGCTGCAATATTCTAC
AATTCGACTAGTTACTGGGATGAGTTTGTGTGGGGTGCATCCTGGTTGTATTATGCTACA
GGAAATACTTCATATCTTCAGCTTGCTACAACTCCTGGTATTGCTAAACGCGCTGGTGCT
TTCTGGGGAGGTCCTGACTACGGCGTGCTCAGCTGGGATAACAAGCTCACTGGATCACAA
GTGCTTCTGAGCCGTTTGAGATTGTTTTTGAGCCCTGGATATCCTTATGAAGATATTTTA
AGTACATTCCATAACCAGACAGGCATAATCATGTGCTCCTTCTTGCCATACTTCTCTTCT
TTTAACCGGACAAAAGGAGGGCTGATACAGTTAAACCACGGAAGGCCTCAGCCTCTTCAG
TATGTAGTCAATGCTGCCTTCCTTGCTACCTTGTATAGTGACTATCTTGCTGCTGCTGAC
ACCCCTGGATGGTATTGTGGACCCAATTTCTATTCCACCGATGTCCTACGTGAATTTGCA
CAGACACAGATTAACTACATCCTTGGCAAGAACCCTAGGAAGATGAGTTATGTTGTGGGC
TTCGGCAATCGCTATCCAAAACGTGTCCACCACAGAGGTGCATCAATTCCTAAAAACAAG
GTCAAGTATAATTGTAAAGGAGGATGGAAGTGGAGGGATTCAAGTAAGAACAATCCGAAT
ACTCTTGTTGGAGCCATGGTTGCTGGACCGGACAAGAATGATGGTTTCCATGATGTTCGT
ACTAATTACAATTATACCGAGCCAACACTTGCTGGAAATGCCGGTTTAGTTGCCGCCCTT
GTAGCTCTATCTGGAGATAAAAGTGTTGGAATTGACAAGAACACAATATTCTCTGCAGTA
CCACCCATGTTCCCCACCCCACCACCTCCGCCAGCTGCTTGGAGACCATGA

Peptide Sequence

PEP ID

XP_016487841.1
PEP Infomation

PREDICTED: endoglucanase 25-like [Nicotiana tabacum]
Sequence

MYGRDPWGGALEINATDSATDDDRSRNLQDFDKAALSRNLDETQQSWLLGPTEQKKKKYV
DLGCIIVSRKVFKWTLGCIIAAALIAGFVTLIVKTVPKHRQRSPPPDNYTLALRKALMFF
NAQRSGKLPKHNNVSWRGSSGMQDGKSDDSTMFKNLVGGYYDAGDAIKFNFPQSFALTML
SWSVIEYSAKYEAAGELSHVKDIIKWGTDYLLKTFNSSADTIDRIVAQVGKGDTSGGPDP
NDHYCWVRPEDIDYPRPVTECHGCSDLAAEMAAALASASIVFKDNKVYSQKLVHGARTLF
KFSREQRGRYSSSNEAAIFYNSTSYWDEFVWGASWLYYATGNTSYLQLATTPGIAKRAGA
FWGGPDYGVLSWDNKLTGSQVLLSRLRLFLSPGYPYEDILSTFHNQTGIIMCSFLPYFSS
FNRTKGGLIQLNHGRPQPLQYVVNAAFLATLYSDYLAAADTPGWYCGPNFYSTDVLREFA
QTQINYILGKNPRKMSYVVGFGNRYPKRVHHRGASIPKNKVKYNCKGGWKWRDSSKNNPN
TLVGAMVAGPDKNDGFHDVRTNYNYTEPTLAGNAGLVAALVALSGDKSVGIDKNTIFSAV
PPMFPTPPPPPAAWRP

Transcript Sequence

Gene sequence data has not been registered.